This tool was meant to show the end user the attack surface that a given device is susceptible to. In implementing these checks we attempt to minimize or eliminate both false positives/false negatives without negatively affecting system stability. Rationale for necessity: When a vulnerability is discovered, Google receives word and applies a patch to Android. The Nexus devices are usually the devices that receive these patches quickest as they deviate the least (read: not at all) from AOSP (Android Open Source Project - The core of Android, where Google commits to). For example, the futex bug (CVE-2014-3153/Towelroot) was known about in late May, early June. This bug took multiple months to get patched on the flagship (at the time) Nexus 5. This leaves users extremely vulnerable to attack from applications. Users mostly do not know that their devices are vulnerable.
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